March 2018 - May 2022: PhD in Theoretical Biology with Prof. Roland Regoes
Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland
Thesis title: “Mathematical modelling of viral infections with sequence, clinical, and serological data”.
Bouman, JA, Hauser, A, Grimm, SL, Wohlfender, M, Bhatt, S, Semenova, E, Gelman, A, Althaus, CL, Riou, J (2023). "Bayesian workflow for time-varying transmission in stratified compartmental infectious disease transmission models" PLOS Computational Biology
Kadelka, S, Bouman, JA, Ashcroft, P, Regoes, RR (2023). "Correcting for Antibody Waning in Cumulative Incidence Estimation from Sequential Serosurveys" American journal of epidemiology
Bouman, JA, Venner, CM, Walker, C, Arts, EJ, Regoes, RR (2023). "Per-pathogen virulence of HIV-1 subtypes A, C and D" Proceedings of the Royal Society B. 290 (1998), 20222572
Bouman, JA, Kadelka, S, Stringhini, S, Pennacchio, F, Meyer, B, Yerly, S, Kaiser, L, Guessous, I, Azman, AS, Bonhoeffer, S, Regoes, RR (2022). "Applying mixture model methods to SARS-CoV-2 serosurvey data from Geneva" Epidemics. 39, 100572
Bouman, JA, Capelli, C, Regoes, RR (2021). "Diversity of vaccination-induced immune responses can prevent the spread of vaccine escape mutants" BioRXiv preprint
Bouman, JA, Riou, J, Bonhoeffer, S, Regoes, RR (2021). "Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches" PLOS Computational Biology. 17(2), e1008728.
Ashcroft, P, Huisman, JS, Lehtinen, S, Bouman, JA, Althaus, CL, Regoes, RR, Bonhoeffer, S (2020). "COVID-19 infectivity profile correction" arXiv preprint
Conference proceedings talk at 30th International Dynamics & Evolution of Human Viruses, Heidelberg, Germany
Conference proceedings talk at Seventh Annual Meeting of the International Society for Evolution, Medicine, and Public Health, Lisbon, Portugal
Conference proceedings talk at Online, Online
Conference proceedings talk at The International HIV Dynamics & Evolution Meeting, Cascais, Portugal